Comparison of microRNA expression using different preservation methods of matched psoriatic skin samples

Research output: Contribution to journalJournal articleResearchpeer-review

  • Marianne B Løvendorf
  • John R Zibert
  • Peter H Hagedorn
  • Christian Glue
  • Ødum, Niels
  • Mads A Røpke
  • Lone Skov
MicroRNAs are non-coding RNA molecules modulating gene expression post-transcriptionally. Formalin-fixed, paraffin-embedding (FFPE) is a standard preservation method often used in clinical practices, but induces RNA degradation. Extracting high-quality RNA from human skin can be challenging as skin contains high levels of RNases. As microRNAs are 19-23 nucleotides long and lack a poly-A tail, they may be less prone to RNA degradation than mRNAs. We investigated whether microRNAs in psoriatic (FFPE) samples reliably reflect microRNA expression in samples less prone to RNA degradation such as fresh-frozen (FS) and Tissue-Tek-embedding (OCT). We found a strong correlation of the microRNA expression levels between all preservation methods of matched psoriatic skin samples (r(s) ranging from 0.91 to 0.95 (P <0.001)). These observations were further confirmed with qRT-PCR. Our results demonstrate that microRNA detection in human skin is robust irrespective of preservation method; thus, microRNAs offer an appropriate and flexible approach in clinical practices and for diagnostic purposes in skin disorders.
Original languageEnglish
JournalExperimental Dermatology
Volume21
Issue number4
Pages (from-to)299-301
Number of pages3
ISSN0906-6705
DOIs
Publication statusPublished - 2012

    Research areas

  • Formaldehyde, Freezing, Gene Expression, Histocytological Preparation Techniques, Humans, MicroRNAs, Oligonucleotide Array Sequence Analysis, Paraffin Embedding, Psoriasis, Real-Time Polymerase Chain Reaction, Skin, Tissue Fixation

ID: 46486793